Piehowski, Paul: search on Z-Library

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1

Muscle Segment Homeobox Genes Direct Embryonic Diapause by Limiting Inflammation in the Uterus

Cha, Jeeyeon, Burnum-Johnson, Kristin E., Bartos, Amanda, Li, Yingju, Baker, Erin S., Tilton, Susan C., Webb-Robertson, Bobbie-Jo M., Piehowski, Paul D., Monroe, Matthew E., Jegga, Anil G., Murata, Sh

Journal:

Journal of Biological Chemistry

Year:

2015

Language:

english

File:

PDF, 5.43 MB

english, 2015

2

High-throughput serum proteomics for the identification of protein biomarkers of mortality in older men

Orwoll, Eric S., Wiedrick, Jack, Jacobs, Jon, Baker, Erin S., Piehowski, Paul, Petyuk, Vladislav, Gao, Yuqian, Shi, Tujin, Smith, Richard D., Bauer, Douglas C., Cummings, Steven R, Nielson, Carrie M.,

Journal:

Year:

2018

Language:

english

File:

PDF, 766 KB

english, 2018

3

Nanodroplet processing platform for deep and quantitative proteome profiling of 10–100 mammalian cells

Zhu, Ying, Piehowski, Paul D., Zhao, Rui, Chen, Jing, Shen, Yufeng, Moore, Ronald J., Shukla, Anil K., Petyuk, Vladislav A., Campbell-Thompson, Martha, Mathews, Clayton E., Smith, Richard D., Qian, We

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 1.66 MB

english, 2018

4

Proteomic Insights into Phycobilisome Degradation, A Selective and Tightly Controlled Process in The Fast-Growing Cyanobacterium Synechococcus elongatus UTEX 2973

Nagarajan, Aparna, Zhou, Mowei, Nguyen, Amelia Y., Liberton, Michelle, Kedia, Komal, Shi, Tujin, Piehowski, Paul, Shukla, Anil, Fillmore, Thomas L., Nicora, Carrie, Smith, Richard D., Koppenaal, David

Journal:

Year:

2019

Language:

english

File:

PDF, 2.60 MB

english, 2019

5

Microscale depletion of high abundance proteins in human biofluids using IgY14 immunoaffinity resin: analysis of human plasma and cerebrospinal fluid

Hyung, Seok-Won, Piehowski, Paul D., Moore, Ronald J., Orton, Daniel J., Schepmoes, Athena A., Clauss, Therese R., Chu, Rosalie K., Fillmore, Thomas L., Brewer, Heather, Liu, Tao, Zhao, Rui, Smith, Ri

Journal:

Analytical and Bioanalytical Chemistry

Year:

2014

Language:

english

File:

PDF, 843 KB

english, 2014

6

Identification of Hip BMD Loss and Fracture Risk Markers Through Population-Based Serum Proteomics

Nielson, Carrie M, Wiedrick, Jack, Shen, Jian, Jacobs, Jon, Baker, Erin S, Baraff, Aaron, Piehowski, Paul, Lee, Christine G, Baratt, Arie, Petyuk, Vladislav, McWeeney, Shannon, Lim, Jeong Youn, Bauer,

Journal:

Journal of Bone and Mineral Research

Year:

2017

Language:

english

File:

PDF, 1.14 MB

english, 2017

7

Spatially-Resolved Proteomics: Rapid Quantitative Analysis of Laser Capture Microdissected Alveolar Tissue Samples

Clair, Geremy, Piehowski, Paul D., Nicola, Teodora, Kitzmiller, Joseph A., Huang, Eric L., Zink, Erika M., Sontag, Ryan L., Orton, Daniel J., Moore, Ronald J., Carson, James P., Smith, Richard D., Whi

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 1.99 MB

english, 2016

8

Automated Nanoflow Two-Dimensional Reversed-Phase Liquid Chromatography System Enables In-Depth Proteome and Phosphoproteome Profiling of Nanoscale Samples

Dou, Maowei, Tsai, Chia-Feng, Piehowski, Paul D, Wang, Yang, Fillmore, Thomas L., Zhao, Rui, Moore, Ronald J., Zhang, Pengfei, Qian, Wei-Jun, Smith, Richard D., Liu, Tao, Kelly, Ryan T., Shi, Tujin, Z

Journal:

Analytical Chemistry

Year:

2019

Language:

english

File:

PDF, 1.45 MB

english, 2019

9

Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens

Aylward, Frank O, Burnum, Kristin E, Scott, Jarrod J, Suen, Garret, Tringe, Susannah G, Adams, Sandra M, Barry, Kerrie W, Nicora, Carrie D, Piehowski, Paul D, Purvine, Samuel O, Starrett, Gabriel J, G

Journal:

The ISME Journal

Year:

2012

Language:

english

File:

PDF, 4.66 MB

english, 2012

10

Targeted brain proteomics uncover multiple pathways to Alzheimer's dementia

Yu, Lei, Petyuk, Vladislav A., Gaiteri, Chris, Mostafavi, Sara, Young-Pearse, Tracy, Shah, Raj C., Buchman, Aron S., Schneider, Julie A., Piehowski, Paul D., Sontag, Ryan L., Fillmore, Thomas L., Shi,

Journal:

Annals of Neurology

Year:

2018

Language:

english

File:

PDF, 1.45 MB

english, 2018

11

Accurate Identification of Deamidation and Citrullination from Global Shotgun Proteomics Data Using a Dual-search Delta Score Strategy

Wang, Xi, Swensen, Adam C., Zhang, Tong, Piehowski, Paul D, Gaffrey, Matthew J., Monroe, Matthew E., Zhu, Ying, Dong, Hailiang, Qian, Wei-Jun

Journal:

Journal of Proteome Research

Year:

2020

Language:

english

File:

PDF, 1.19 MB

english, 2020

12

Sources of Technical Variability in Quantitative LC–MS Proteomics: Human Brain Tissue Sample Analysis

Piehowski, Paul D., Petyuk, Vladislav A., Orton, Daniel J., Xie, Fang, Moore, Ronald J., Ramirez-Restrepo, Manuel, Engel, Anzhelika, Lieberman, Andrew P., Albin, Roger L., Camp, David G., Smith, Richa

Journal:

Journal of Proteome Research

Year:

2013

Language:

english

File:

PDF, 1.21 MB

english, 2013

13

Nanowell-mediated two-dimensional liquid chromatography enables deep proteome profiling of

Dou, Maowei, Zhu, Ying, Liyu, Andrey, Liang, Yiran, Chen, Jing, Piehowski, Paul D., Xu, Kerui, Zhao, Rui, Moore, Ronald J., Atkinson, Mark A., Mathews, Clayton E., Qian, Wei-Jun, Kelly, Ryan T.

Journal:

Chemical Science

Year:

2018

Language:

english

File:

PDF, 1.17 MB

english, 2018

14

The human brainome: network analysis identifies HSPA2 as a novel Alzheimer’s disease target

Petyuk, Vladislav A, Chang, Rui, Ramirez-Restrepo, Manuel, Beckmann, Noam D, Henrion, Marc Y R, Piehowski, Paul D, Zhu, Kuixi, Wang, Sven, Clarke, Jennifer, Huentelman, Matthew J, Xie, Fang, Andreev,

Journal:

Year:

2018

Language:

english

File:

PDF, 1.51 MB

english, 2018

15

A proteome-wide assessment of the oxidative stress paradigm for metal and metal-oxide nanomaterials in human macrophages

Zhang, Tong, Gaffrey, Matthew J., Thomas, Dennis G., Weber, Thomas J., Hess, Becky M., Weitz, Karl K., Piehowski, Paul D., Petyuk, Vladislav A., Moore, Ronald J., Qian, Wei-Jun, Thrall, Brian D.

Journal:

Year:

2020

File:

PDF, 5.26 MB

2020

16

Nanotome Cluster Bombardment to Recover Spatial Chemistry After Preparation of Biological Samples for SIMS Imaging

Michael E. Kurczy, Paul D. Piehowsky, David Willingham, Kathleen A. Molyneaux, Michael L. Heien, Nicholas Winograd, Andrew G. Ewing

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2010

Language:

english

File:

PDF, 1.02 MB

english, 2010

17

Micropuncture of Bowman's Space in Mice Facilitated by 2 Photon Microscopy

Matsushita, Katsuyuki, Golgotiu, Kirsti, Orton, Daniel J., Smith, Richard D., Rodland, Karin D., Piehowski, Paul D., Hutchens, Michael P.

Journal:

Journal of Visualized Experiments

Year:

2018

Language:

english

File:

PDF, 1.61 MB

english, 2018

18

A Boosting to Amplify Signal with Isobaric Labeling (BASIL) Strategy for Comprehensive Quantitative Phosphoproteomic Characterization of Small Populations of Cells

Yi, Lian, Tsai, Chia-Feng, Dirice, Ercument, Swensen, Adam C., Chen, Jing, Shi, Tujin, Gritsenko, Marina A., Chu, Rosalie K., Piehowski, Paul D, Smith, Richard D., Rodland, Karin D, Atkinson, Mark A.,

Journal:

Analytical Chemistry

Year:

2019

Language:

english

File:

PDF, 800 KB

english, 2019

19

STEPS: A grid search methodology for optimized peptide identification filtering of MS/MS database search results

Piehowski, Paul D., Petyuk, Vladislav A., Sandoval, John D., Burnum, Kristin E., Kiebel, Gary R., Monroe, Matthew E., Anderson, Gordon A., Camp, David G., Smith, Richard D.

Journal:

Year:

2013

Language:

english

File:

PDF, 309 KB

english, 2013

20

THE HUMAN BRAINOME: GENOME, TRANSCRIPTOME, AND PROTEOME INTERACTION IN HUMAN CORTEX

Myers, Amanda, Ramirez-Restrepo, Manuel, Petyuk, Vladislav, Piehowski, Paul, Gaiteri, Chris, Xie, Fang, Smith, Richard

Journal:

Alzheimer's & Dementia

Year:

2014

Language:

english

File:

PDF, 58 KB

english, 2014

21

SNaPP: Simplified Nanoproteomics Platform for Reproducible Global Proteomic Analysis of Nanogram Protein Quantities

Huang, Eric L., Piehowski, Paul D., Orton, Daniel J., Moore, Ronald J., Qian, Wei-Jun, Casey, Cameron P., Sun, Xiaofei, Dey, Sudhansu K., Burnum-Johnson, Kristin E., Smith, Richard D.

Journal:

Year:

2016

Language:

english

File:

PDF, 557 KB

english, 2016

22

A unique deubiquitinase that deconjugates phosphoribosyl-linked protein ubiquitination

Qiu, Jiazhang, Yu, Kaiwen, Fei, Xiaowen, Liu, Yao, Nakayasu, Ernesto S, Piehowski, Paul D, Shaw, Jared B, Puvar, Kedar, Das, Chittaranjan, Liu, Xiaoyun, Luo, Zhao-Qing

Journal:

Year:

2017

Language:

english

File:

PDF, 3.78 MB

english, 2017

23

Application of multiplexed ion mobility spectrometry towards the identification of host protein signatures of treatment effect in pulmonary tuberculosis

Kedia, Komal, Wendler, Jason P., Baker, Erin S., Burnum-Johnson, Kristin E., Jarsberg, Leah G., Stratton, Kelly G., Wright, Aaron T., Piehowski, Paul D., Gritsenko, Marina A., Lewinsohn, David M., Sig

Journal:

Year:

2018

Language:

english

File:

PDF, 2.65 MB

english, 2018

24

[Methods in Molecular Biology] || Quantitative Proteomic Analysis of Mass Limited Tissue Samples for Spatially Resolved Tissue Profiling

Piehowski, Paul D.

Year:

2017

Language:

english

File:

PDF, 209 KB

english, 2017

25

Nanoproteomics comes of age

Zhu, Ying, Piehowski, Paul D., Kelly, Ryan T., Qian, Wei-Jun

Journal:

Expert Review of Proteomics

Year:

2018

Language:

english

File:

PDF, 1.05 MB

english, 2018

26

Benchtop-compatible sample processing workflow for proteome profiling of

Xu, Kerui, Liang, Yiran, Piehowski, Paul D., Dou, Maowei, Schwarz, Kaitlynn C., Zhao, Rui, Sontag, Ryan L., Moore, Ronald J., Zhu, Ying, Kelly, Ryan T.

Journal:

Analytical and Bioanalytical Chemistry

Year:

2018

Language:

english

File:

PDF, 1.78 MB

english, 2018

27

MS/MS Methodology To Improve Subcellular Mapping of Cholesterol Using TOF-SIMS

Piehowski, Paul D., Carado, Anthony J., Kurczy, Michael E., Ostrowski, Sara G., Heien, Michael L., Winograd, Nicholas, Ewing, Andrew G.

Journal:

Analytical Chemistry

Year:

2008

Language:

english

File:

PDF, 929 KB

english, 2008

28

Moonshot Objectives

Rodland, Karin D., Piehowski, Paul, Smith, Richard D.

Journal:

The Cancer Journal

Year:

2018

Language:

english

File:

PDF, 128 KB

english, 2018

29

Author Correction: Informed-Proteomics: open-source software package for top-down proteomics

Park, Jungkap, Piehowski, Paul D, Wilkins, Christopher, Zhou, Mowei, Mendoza, Joshua, Fujimoto, Grant M, Gibbons, Bryson C, Shaw, Jared B, Shen, Yufeng, Shukla, Anil K, Moore, Ronald J, Liu, Tao, Pety

Journal:

Year:

2018

Language:

english

File:

PDF, 645 KB

english, 2018

30

Advances in microscale separations towards nanoproteomics applications

Yi, Lian, Piehowski, Paul D., Shi, Tujin, Smith, Richard D., Qian, Wei-Jun

Journal:

Journal of Chromatography A

Year:

2017

Language:

english

File:

PDF, 1.09 MB

english, 2017

31

New mass spectrometry technologies contributing towards comprehensive and high throughput omics analyses of single cells

Couvillion, Sneha P., Zhu, Ying, Nagy, Gabe, Adkins, Joshua N., Ansong, Charles, Renslow, Ryan S., Piehowski, Paul D., Ibrahim, Yehia M., Kelly, Ryan T., Metz, Thomas O.

Journal:

The Analyst (Royal Society of Chemistry)

Year:

2019

Language:

english

File:

PDF, 1.95 MB

english, 2019

32

Freeze-Etching and Vapor Matrix Deposition for ToF-SIMS Imaging of Single Cells

Piehowski, Paul D., Kurczy, Michael E., Willingham, David, Parry, Shawn, Heien, Michael L., Winograd, Nicholas, Ewing, Andrew G.

Journal:

Year:

2008

Language:

english

File:

PDF, 1.30 MB

english, 2008

33

Deficient expression of aldehyde dehydrogenase 1A1 is consistent with increased sensitivity of Gorlin syndrome patients to radiation carcinogenesis

Wright, Aaron T., Magnaldo, Thierry, Sontag, Ryan L., Anderson, Lindsey N., Sadler, Natalie C., Piehowski, Paul D., Gache, Yannick, Weber, Thomas J.

Journal:

Molecular Carcinogenesis

Year:

2015

Language:

english

File:

PDF, 1.25 MB

english, 2015

34

Correction: Enrichment and Broad Representation of Plant Biomass-Degrading Enzymes in the Specialized Hyphal Swellings of Leucoagaricus gongylophorus, the Fungal Symbiont of Leaf-Cutter Ants

Aylward, Frank O., Khadempour, Lily, Tremmel, Daniel M., McDonald, Bradon R., Nicora, Carrie D., Wu, Si, Moore, Ronald J., Orton, Daniel J., Monroe, Matthew E., Piehowski, Paul D., Purvine, Samuel O.,

Journal:

Year:

2015

Language:

english

File:

PDF, 982 KB

english, 2015

35

Nipah Virus-Like Particle Egress Is Modulated by Cytoskeletal and Vesicular Trafficking Pathways: a Validated Particle Proteomics Analysis

Johnston, Gunner P., Bradel-Tretheway, Birgit, Piehowski, Paul D., Brewer, Heather M., Lee, Bom Nae Rin, Usher, Nicholas T., Zamora, J. Lizbeth Reyes, Ortega, Victoria, Contreras, Erik M., Teuton, Jer

Journal:

Year:

2019

Language:

english

File:

PDF, 2.34 MB

english, 2019

36

Application of multiplexed ion mobility spectrometry towards the identification of host protein signatures of treatment effect in pulmonary tuberculosis

Kedia, Komal, Wendler, Jason P., Baker, Erin S., Burnum-Johnson, Kristin E., Jarsberg, Leah G., Stratton, Kelly G., Wright, Aaron T., Piehowski, Paul D., Gritsenko, Marina A., Lewinsohn, David M., Sig

Journal:

Year:

2018

File:

PDF, 2.65 MB

2018

37

High-resolution ultrahigh-pressure long column reversed-phase liquid chromatography for top-down proteomics

Shen, Yufeng, Tolić, Nikola, Piehowski, Paul D., Shukla, Anil K., Kim, Sangtae, Zhao, Rui, Qu, Yi, Robinson, Errol, Smith, Richard D., Paša-Tolić, Ljiljana

Journal:

Journal of Chromatography A

Year:

2017

Language:

english

File:

PDF, 4.96 MB

english, 2017

38

Near-Single-Cell Proteomics Profiling of the Proximal Tubular and Glomerulus of the Normal Human Kidney

Sigdel, Tara K., Piehowski, Paul D., Roy, Sudeshna, Liberto, Juliane, Hansen, Joshua R., Swensen, Adam C., Zhao, Rui, Zhu, Ying, Rashmi, Priyanka, Schroeder, Andrew, Damm, Izabella, Sur, Swastika, Luo

Journal:

Frontiers in Medicine

Year:

2020

File:

PDF, 1.51 MB

2020

39

Proteomic assessment of serum biomarkers of longevity in older men

Orwoll, Eric S., Wiedrick, Jack, Nielson, Carrie M., Jacobs, Jon, Baker, Erin S., Piehowski, Paul, Petyuk, Vladislav, Gao, Yuqian, Shi, Tujin, Smith, Richard D., Bauer, Douglas C., Cummings, Steven R.

Journal:

Year:

2020

File:

PDF, 1.86 MB

2020

40

THE HUMAN BRAINOME: HUMAN BRAIN GENOME, TRANSCRIPTOME, AND PROTEOME INTEGRATION

Myers, Amanda, Chang, Rui, Petyuk, Vladislav A., Ramirez-Restrepo, Manuel, Beckmann, Noam D., Henrion, Marc Y.R., Zhu, Kuixi, Wang, Sven, Piehowski, Paul D., Clarke, Jennifer, Huentelman, Matthew J.,

Journal:

Alzheimer's & Dementia

Year:

2016

Language:

english

File:

PDF, 606 KB

english, 2016

41

Increasing confidence of LC–MS identifications by utilizing ion mobility spectrometry

Crowell, Kevin L., Baker, Erin S., Payne, Samuel H., Ibrahim, Yehia M., Monroe, Matthew E., Slysz, Gordon W., LaMarche, Brian L., Petyuk, Vladislav A., Piehowski, Paul D., Danielson, William F., Ander

Journal:

International Journal of Mass Spectrometry

Year:

2013

Language:

english

File:

PDF, 1.07 MB

english, 2013

42

Residual tissue repositories as a resource for population-based cancer proteomic studies

Piehowski, Paul D., Petyuk, Vladislav A., Sontag, Ryan L., Gritsenko, Marina A., Weitz, Karl K., Fillmore, Thomas L., Moon, Jamie, Makhlouf, Hala, Chuaqui, Rodrigo F., Boja, Emily S., Rodriguez, Henry

Journal:

Clinical Proteomics

Year:

2018

Language:

english

File:

PDF, 2.11 MB

english, 2018

43

Mass Spectrometry Imaging of Mating Tetrahymena Show That Changes in Cell Morphology Regulate Lipid Domain Formation

Michael E. Kurczy, Paul D. Piehowski, Craig T. van Bell, Michael L. Heien, Nicolas Winograd, Andrew G. Ewing and Steven Boxer

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.44 MB

english, 2010

44

Informed-Proteomics: open-source software package for top-down proteomics

Park, Jungkap, Piehowski, Paul D, Wilkins, Christopher, Zhou, Mowei, Mendoza, Joshua, Fujimoto, Grant M, Gibbons, Bryson C, Shaw, Jared B, Shen, Yufeng, Shukla, Anil K, Moore, Ronald J, Liu, Tao, Pety

Journal:

Year:

2017

Language:

english

File:

PDF, 1.43 MB

english, 2017

45

Time-of-Flight Secondary Ion Mass Spectrometry Imaging of Subcellular Lipid Heterogeneity: Poisson Counting and Spatial Resolution

Piehowski, Paul D., Davey, Angel M., Kurczy, Michael E., Sheets, Erin D., Winograd, Nicholas, Ewing, Andrew G., Heien, Michael L.

Journal:

Analytical Chemistry

Year:

2009

Language:

english

File:

PDF, 2.74 MB

english, 2009

46

Subnanogram proteomics: impact of LC column selection, MS instrumentation and data analysis strategy on proteome coverage for trace samples

Zhu, Ying, Zhao, Rui, Piehowski, Paul D., Moore, Ronald J., Lim, Sujung, Orphan, Victoria J., Paša-Tolić, Ljiljana, Qian, Wei-Jun, Smith, Richard D., Kelly, Ryan T.

Journal:

International Journal of Mass Spectrometry

Year:

2017

Language:

english

File:

PDF, 820 KB

english, 2017

47

Spatially resolved proteome mapping of laser capture microdissected tissue with automated sample transfer to nanodroplets

Zhu, Ying, Dou, Maowei, Piehowski, Paul D., Liang, Yiran, Wang, Fangjun, Chu, Rosalie K., Chrisler, Will, Smith, Jordan N., Schwarz, Kaitlynn C., Shen, Yufeng, Shukla, Anil K., Moore, Ronald J., Smith

Journal:

Molecular & Cellular Proteomics

Year:

2018

Language:

english

File:

PDF, 994 KB

english, 2018

48

Automated mass spectrometry imaging of over 2000 proteins from tissue sections at 100-μm spatial resolution

Piehowski, Paul D., Zhu, Ying, Bramer, Lisa M., Stratton, Kelly G., Zhao, Rui, Orton, Daniel J., Moore, Ronald J., Yuan, Jia, Mitchell, Hugh D., Gao, Yuqian, Webb-Robertson, Bobbie-Jo M., Dey, Sudhans

Journal:

Nature Communications

Year:

2020

File:

PDF, 3.05 MB

2020

49

Block Design with Common Reference Samples Enables Robust Large-Scale Label-Free Quantitative Proteome Profiling

Zhang, Tong, Gaffrey, Matthew J., Monroe, Matthew E., Thomas, Dennis G., Weitz, Karl K., Piehowski, Paul D., Petyuk, Vladislav A., Moore, Ronald J., Thrall, Brian D., Qian, Wei-Jun

Journal:

Journal of Proteome Research

Year:

2020

File:

PDF, 993 KB

2020

50

A review of imputation strategies for isobaric labeling-based shotgun proteomics

Bramer, Lisa M., Irvahn, Jan, Piehowski, Paul D, Rodland, Karin D, Webb-Robertson, Bobbie-Jo M.

Journal:

Journal of Proteome Research

Year:

2020

File:

PDF, 668 KB

2020

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